BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E07SP1|AL428920
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1790 0.0
>3x_Contig1373
Length = 6197
Score = 1790 bits (901), Expect = 0.0
Identities = 910/915 (99%)
Strand = Plus / Minus
Query: 1 attcaagatcctggagatccttccaataatatcagtagaggttcctttaacttaagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6168 attcaagatcctggagatccttccaataatatcagtagaggttcctttaacttaagaaat 6109
Query: 61 atcaagaagggatttgccggtgcgtttgatttactggccaatagatgcttcgaattggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 atcaagaagggatttgccggtgcgtttgatttactggccaatagatgcttcgaattggat 6049
Query: 121 tctgctactttcaaagatcggattggaagtagtatattgggtaatgtgatcaagtacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 tctgctactttcaaagatcggattggaagtagtatattgggtaatgtgatcaagtacaag 5989
Query: 181 ggaacaaaaagagatttcaacgacgaaagagatctggttatcaatgaagccatccaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 ggaacaaaaagagatttcaacgacgaaagagatctggttatcaatgaagccatccaggag 5929
Query: 241 aacgagaaataccataacaagaggggtagaatagtccatgatgatttattcaccgatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 aacgagaaataccataacaagaggggtagaatagtccatgatgatttattcaccgatatt 5869
Query: 301 agtgatattgaagctgaagaagaaatctaccaggtgcaggaacctccaactaaaaagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 agtgatattgaagctgaagaagaaatctaccaggtgcaggaacctccaactaaaaagact 5809
Query: 361 aagaaggacaagagtaaagaaaagaaggaaagaaaagagaagagaagggaaaagagaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5808 aagaaggacaagagtaaagaaaagaaggaaagaaaagagaagagaagggaaaagagaaag 5749
Query: 421 aagcaacagctcaaagaaaatactgagagggtacaagaggtcgaagaagataattatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5748 aagcaacagctcaaagaaaatactgagagggtacaagaggtcgaagaagataattatgat 5689
Query: 481 ccgactgaggcaattattgttaatgacgaaccatccgaacmagaagatgattatgatcct 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5688 ccgactgaggcaattattgttaatgacgaaccatccgaacaagaagatgattatgatcct 5629
Query: 541 agtaaaccttccgtagatgattacmtgggcttgccggaagamaacaatgatgaaaatgac 600
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 5628 agtaaaccttccgtagatgattacatgggcttgccggaagaaaacaatgatgaaaatgac 5569
Query: 601 aaggataccaaagaagaagcgagaacaccagtgataaaccttatagaagatgaaaatggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 aaggataccaaagaagaagcgagaacaccagtgataaaccttatagaagatgaaaatggt 5509
Query: 661 gccagtgacgattcgaactctgatccgaaaatgccactagtagacaaacagaccaaaaga 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5508 gccagtgacgattcgaactctgatccgaaaatgcaactagtagacaaacagaccaaaaga 5449
Query: 721 gattattggttaagcaaaggccaagccatgtaatatgacaaccaacttttcaattcagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 gattattggttaagcaaaggccaagccatgtaatatgacaaccaacttttcaattcagtt 5389
Query: 781 tatgtatatataaatacggtatattcatacgttaatcttgttaatacaagatccagtaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 tatgtatatataaatacggtatattcatacgttaatcttgttaatacaagatccagtaat 5329
Query: 841 catatcagaagtctagcttgacagttcgggatcttttcttatcagatttaaacttctttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5328 catatcagaagtctagcttgacagttcgggatcttttcttatcagatttaaacttctttt 5269
Query: 901 cactaagccgtacct 915
|||||||||||||||
Sbjct: 5268 cactaagccgtacct 5254
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9258
Number of Sequences: 1807
Number of extensions: 9258
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)